Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888984.1_cds_XP_016443639.1_38778
CDS Infomation

[gene=LOC107768976] [db_xref=GeneID:107768976] [protein=30S ribosomal protein S1 homolog A-like] [protein_id=XP_016443639.1] [location=join(9466..10356,11414..11488,11569..11640,12237..12317,12539..12636,14677..14802,17334..17382,17475..17645)] [gbkey=CDS]
Sequence

ATGCCAATTTTTCTTCTTCCATGTAAGTCTTTCTCTATACTCAATCCAATTCTGCCCCTC
AACACTTCTGTTATTTACAATACTGCCACCAAATTCTCAATTTTTTCCACTCCCCCAAAA
TACCCACTTGTTAAAACCCCAAAATTTTCCAAGAATTTGTCTTCCCATTGGAATTCTCAA
ATAAGTTTACATACCCATGTCTCGTTTTGCTCTAAAAATGAAATCTTGGAAGAATTTAGC
ACTACCCAGTTGGCTAAAGTGCCTGAAATTGAGGAGTCTGAAGAGTTAGAATTGCTTAAT
AAGCCATACTTAAAGCAGATAAATAATGGGGTTGGTGCAGAAATAGAAGAGGAGCCTAAA
AAAGTTAGTAAAGATGAAGTCTTGGAGCCTTTTTACAAGTTATTTAAGCCTAGGGAGGAG
TCATTGGAACAAGAAAGTAGTGATACAGAAGATACAGAACAGGAGGAGGAAGAAGTTCAT
TCAGTTGAAGCAGAAAGTAAGAAGATTAGTGTAGAGTATTACGAACCGAAACCGGGTGAT
TTGGTGGTAGGTGTTGTGGTTTCAGGCAATGAGAATAAACTTGATGTGAATGTTGGTGCT
GACCTTTTGGGTACAATGTTAACTAAGGATGTTTTGCCTTTGTATGACAAAGAGATGGGT
TATTTGTTGTGTGATTTGGAGAAGGATGCTGAGGAATTCTTGGTAAGAGGGAAAATGGGA
ATTGTGAGTTATGATGAGGCAATAGAGTGTGGGGAATCAATGTCAGGGAAGCCTGTTGTG
GAGCCTGGGACTGTTCTTTTTGCTGAGGTTCTCGGAAGAACTCTCAGTGGTCGGCCGTTA
CTGTCGACGAGAAGGCTCTTTAGACGCATTGCTTGGCATCGAGTGAGGCAGATTAAACAA
CTAAATGAACCTATTGAGGTGGTGATAACGGAGTGGAACACTGGCGGTCTTCTTACCAGA
ATAGAGGGCTTACGGGCTTTTCTTCCTAAGGCTGATTTAATGAACAGAGTTAATAGTTAT
ACCGAGCTGAAGGAGAATGTGGGGCGTCGAATTAATGTGCTTATTACCAGAATAAACGAA
GAGACTAATGACTTAATACTTAGTGAGAAGGAAGCTTGGCAAATGTTAAATCTGCAAGAG
GGGGTCCTTGTGGAAGGAACAGTGAAAAAGCTTTTTCCCTTTGGCGCGCAGATAAGGATT
GGTGAAACAAACCGAAGTGGCTTGCTACACATCTCAAATGTCACCCGAGGCGAGATTACT
TCTATCAATAACTTGTTAGCTGTTGATGAGAAGGTGAAAGTTATGGTTGTGAAGTCAATG
TTTCCTGACAAAATATCTCTCAGTATTGCTGAACTTGAAAGCGAGCCAGGATTATTTTTA
AAGGACAAGGAGAAAGTATTCGCTGAAGCAAAAGAGATGGCGAAGAAGTACAGACAGAAC
CTACGAACTGTTTCAGCAACAAGAAAACCAGAACCCCTTCCAACCGATAGACTACCTTTC
GAAGATGAAGAAAGTCTGTATGCTAATTGGAATTGGTTCAAGTTTGAGAGGGATACCGTA
TAA

Peptide Sequence

PEP ID

XP_016443639.1
PEP Infomation

PREDICTED: 30S ribosomal protein S1 homolog A-like [Nicotiana tabacum]
Sequence

MPIFLLPCKSFSILNPILPLNTSVIYNTATKFSIFSTPPKYPLVKTPKFSKNLSSHWNSQ
ISLHTHVSFCSKNEILEEFSTTQLAKVPEIEESEELELLNKPYLKQINNGVGAEIEEEPK
KVSKDEVLEPFYKLFKPREESLEQESSDTEDTEQEEEEVHSVEAESKKISVEYYEPKPGD
LVVGVVVSGNENKLDVNVGADLLGTMLTKDVLPLYDKEMGYLLCDLEKDAEEFLVRGKMG
IVSYDEAIECGESMSGKPVVEPGTVLFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQ
LNEPIEVVITEWNTGGLLTRIEGLRAFLPKADLMNRVNSYTELKENVGRRINVLITRINE
ETNDLILSEKEAWQMLNLQEGVLVEGTVKKLFPFGAQIRIGETNRSGLLHISNVTRGEIT
SINNLLAVDEKVKVMVVKSMFPDKISLSIAELESEPGLFLKDKEKVFAEAKEMAKKYRQN
LRTVSATRKPEPLPTDRLPFEDEESLYANWNWFKFERDTV

Transcript Sequence

Gene sequence data has not been registered.